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metadata
tags:
  - generated_from_trainer
metrics:
  - precision
  - recall
  - f1
model-index:
  - name: biobert-v1.1-BC2GM-NCBI-IOBES
    results: []

biobert-v1.1-BC2GM-NCBI-IOBES

This model is a fine-tuned version of sujeongh/biobert-v1.1-BC2GM-IOBES on the None dataset. It achieves the following results on the evaluation set:

  • Loss: 0.3039
  • Precision: 0.0
  • Recall: 0.0
  • F1: 0.0

Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure

Training hyperparameters

The following hyperparameters were used during training:

  • learning_rate: 1e-05
  • train_batch_size: 32
  • eval_batch_size: 32
  • seed: 42
  • optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
  • lr_scheduler_type: linear
  • num_epochs: 4

Training results

Training Loss Epoch Step Validation Loss Precision Recall F1
0.3332 1.0 1 0.3285 0.0357 0.0116 0.0175
0.3332 2.0 2 0.3154 0.0 0.0 0.0
0.3332 3.0 3 0.3076 0.0 0.0 0.0
0.3332 4.0 4 0.3039 0.0 0.0 0.0

Framework versions

  • Transformers 4.28.1
  • Pytorch 2.3.1+cu121
  • Datasets 2.19.1
  • Tokenizers 0.13.3