Training in progress, epoch 1

.gitignore

@@ -0,0 +1 @@
+checkpoint-*/

config.json

@@ -0,0 +1,40 @@
+{
+  "_name_or_path": "sujeongh/biobert-v1.1-BC2GM-IOBES",
+  "architectures": [
+    "BertForTokenClassification"
+  ],
+  "attention_probs_dropout_prob": 0.1,
+  "classifier_dropout": null,
+  "gradient_checkpointing": false,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.1,
+  "hidden_size": 768,
+  "id2label": {
+    "0": "E-Disease",
+    "1": "B-Disease",
+    "2": "I-Disease",
+    "3": "O",
+    "4": "S-Disease"
+  },
+  "initializer_range": 0.02,
+  "intermediate_size": 3072,
+  "label2id": {
+    "B-Disease": 1,
+    "E-Disease": 0,
+    "I-Disease": 2,
+    "O": 3,
+    "S-Disease": 4
+  },
+  "layer_norm_eps": 1e-12,
+  "max_position_embeddings": 512,
+  "model_type": "bert",
+  "num_attention_heads": 12,
+  "num_hidden_layers": 12,
+  "pad_token_id": 0,
+  "position_embedding_type": "absolute",
+  "torch_dtype": "float32",
+  "transformers_version": "4.28.1",
+  "type_vocab_size": 2,
+  "use_cache": true,
+  "vocab_size": 28996
+}

pytorch_model.bin

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:ad08cea92c779ffa8f3cd6726ef3bb28495c4dd97c23088d4ef609168258cd71
+size 430966698

runs/Sep01_16-32-29_andlab-server/1725208354.0367427/events.out.tfevents.1725208354.andlab-server.3438106.24

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:09ed85bbd85b1fb5779526e3b3a0d942582d70913d2a4f6003c86451c1b52e9b
+size 5907

runs/Sep01_16-32-29_andlab-server/events.out.tfevents.1725208354.andlab-server.3438106.23

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:9827f247dab14b1bff263356ece114c4328a721a753557f87d813652fb15fbed
+size 4575

special_tokens_map.json

@@ -0,0 +1,7 @@
+{
+  "cls_token": "[CLS]",
+  "mask_token": "[MASK]",
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "unk_token": "[UNK]"
+}

tokenizer_config.json

@@ -0,0 +1,15 @@
+{
+  "clean_up_tokenization_spaces": true,
+  "cls_token": "[CLS]",
+  "do_basic_tokenize": true,
+  "do_lower_case": false,
+  "mask_token": "[MASK]",
+  "model_max_length": 512,
+  "never_split": null,
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "strip_accents": null,
+  "tokenize_chinese_chars": true,
+  "tokenizer_class": "BertTokenizer",
+  "unk_token": "[UNK]"
+}

training_args.bin

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:d7920afbde17fb482cc095e9c81f9766161c2ca05e36da4a405fadfb41b6f534
+size 4088